ALGORITHMS & COMPUTER PROGRAMMING

THOR interest group at INESC-ID Lisboa.

Contacts

{aplf,luis.russo}@ist.utl.pt

Seminars, meetings, etc.

2023/11/21: An algorithmic approach to the comparison of phylogenetic trees
2023/02/09: An algorithmic approach to the comparison of phylogenetic trees and networks
2023/01/30: Portable Software Optimizations for Current and Future Memory-Hierarchies Architectures
2022/12/22: Data integration and visualization in large scale phylogenetic analysis
2022/06/17: MEIC: Fast matroid intersection and applications
2021/12/21: MEIC: Computing Geodesic Tree Distances with the GTP Algorithm
2021/11/26: MEIC: Multi Objective Set Covering Problem, an Exact Approach
2021/11/22: MEIC: Learning Data Structures
2021/09/17: DEIC: Graph Processing: Distributed Frameworks, Approximations and Compact Data Structures
2021/09/16: Coping with NP-hard problems by using parameterized algorithms
2021/01/27: MEIC: A Novel Approach for Semantic Pure Steganography
2021/01/22: MEIC: A framework for large scale phylogenetic analysis
2021/01/19: MEIC: Onboard Flight Dynamic Route Optimization
2021/01/15: MEIC: Study of the brain’s dynamic functional connectivity with simultaneous
2021/01/13: MEIC: A graph algorithm library based on compact data structures
2021/01/13: MEIC: Library of efficient algorithms for phylogenic analysis
2020/12/04: Dr. habil.: On algorithm engineering
2019/12/13: MMA: Incremental hypervolume calculation in $d$ dimensions
2019/12/04: MMA: Simulation based approach to bacterial evolution
2019/11/14: MEIC: Cache-oblivious nested loops based on Hilbert curves
2019/11/08: Data processing methodologies in the area of E-Health for categorizing therapeutic responses in patients with migraine (Friday, November 08, at 11:00)
2019/10/25: MEIC: Large scale phylogenetic inference from noisy data based on minimum weight spanning arborescences
2019/07/02: DEIC: Complex networks analysis from an edge perspective
2019/06/25: MEBiom: Community Finding with Applications on Phylogentic Networks
2019/02/20: "Origins of NP and P", by Jack Edmonds (Wednesday, February 20, at 13:30)
2019/01/22: PMEIC: Large scale phylogenetic inference from noisy data based on minimum weight spanning arborescences and local optimization
2018/12/17: MMA: An analysis of the Geodesic Distance and other comparative metrics for tree-like structures
2018/11/05: MEIC: Fast mapping and querying over large scale typing data
2018/10/10: Improved Maximum Likelihood Decoding using sparse Parity-Check Matrices
2018/10/10: Efficient paths in ordinal weighted graphs
2018/07/23-25: StringMasters -- Lisbon 2018
2018/07/20: Multi-Objective Optimization Workshop
2018/07/18: MEIC: Computational Complexity of Games and Puzzles
2018/07/05: PMEIC: Cache-Oblivious Loops at Higher Dimensions
2018/07/03: THOR 17: DevOps and workflow automation in bioinformatics and computational biology
2018/05/09: THOR 16: Balance and Frustration in Signed Networks
2018/03/08: Fast-SG: An alignment-free algorithm for hybrid assembly
2018/03/02: Algorithmic issues in cophylogenetic analysis
2018/01/11: Static versus Dynamic Deferred Acceptance in School Choice: Theory and Experiment
2017/12/18: Computational Geometry Challenges & Results in Multiobjective Optimization, Monday, December 18, at 14:30 (room 020)
2017/11/24: Boolean networks: modeling gene regulatory networks, Friday, November 24, at 14:00 (room FA1)
2017/11/16: THOR 15: Layout algorithms for phylogenetic trees
2017/11/09: MEIC: Large scale and dynamic phylogenetic inference from epidemic data
2017/11/02: Machine Learning for Multi-step Ahead Forecasting of Volatility Proxies, Thursday, November 2, at 15:00 (room 336)
2017/10/20: MEIC: Fast hierarchical graph clustering
2017/10/13: [GAIPS SEMINAR] Robust reconstruction of complex networks from sparse data - Friday, 13th October at 10:00
2017/10/12: Bicriteria Fixed-Charge Network Flow – Separating Fixed Costs and Flow Costs
2017/09/14: Efficient computation of the search region in multi-objective optimization
2017/07/05: THOR 14: Reward and punishment in collective risk dilemmas
2017/06/28: THOR 13: Cooperation dynamics in finite populations
2017/05/31: THOR 12: Visualização e análise de árvores filogenéticas
2017/05/17: THOR 11: Using Spark and GraphX to parallelize large scale simulations of bacterial populations over host contact networks
2017/05/03: THOR 10: Distância de Hamming entre todos os pares em tempo subquadrático
2017/04/19: THOR 9: Strain specific gene variant finding with chewBBACA
2017/04/07: Discovery of large genomic inversions using long range information, April 7th, 10:30-11:30 (IMM)
2017/03/08: THOR 8: Emergence of social balance in signed networks
2017/02/22: THOR 7: Link/cut trees and applications
2017/02/16: THOR 6: On the number and structure of Boolean functions compatible with a regulatory network topology
2017/02/02: THOR 5: Fast hierarchical graph clustering
2017/01/26: THOR 4: Large scale and dynamic phylogenetic inference from epidemic data
2017/01/12: THOR 3: Cálculo eficiente de caminhos mais curtos em grafos de grande dimensão
2016/12/15: THOR 2: Métricas para comparação de árvores
2016/11/10: THOR 1: Grafos, árvores e algoritmos para inferência filogenética
2016/11/07: Complex Networks Seminars, November 7th, 14:00 and 15:10
2016/10/27: THOR 0: Grupo de discussão THOR